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2006-5-5 10:32:33

Cell:昼夜节律基因Clock实际上是乙酰化转移酶

生物谷报道:目前发现昼夜节律是由一组基因控制的,但这些基因如何设定节律的机制还并不清楚。这些基因如Per, Time, Clock等。其中Clock基因是昼夜节律起步基因的核心成分之一,它具有组蛋白乙酰化转移酶(HAT)的活性。Clock与乙酰化辅酶同源。Clock基因与HAT家族的MYST基因有相互结合的motif。实际上Clock基因与HAT家族中SRC亚家族的ACTR基因高度同源,同时拥有组氨酸H3和H4特异性酶点。Clock的乙酰化转移酶活性对于昼夜节律是必需的。此次进一步鉴定了Clock基因有一个新的DNA结合位点与HAT结合,这提示了它本身就是一种乙酰化转移酶,在细胞内发挥调节作用机制。为此,Cell还有专文对这篇文章进行评论(附后)。

同样,最近有关Clock的基因研究进展十分迅速,在前不久的Cell上还有两篇相关的报道。

Circadian Transcription: Passing the HAT to CLOCK, Cell, Volume 125, Issue 3, 5 May 2006, Pages 424-426
Paul E. Hardin1  and Wangjie Yu1 Abstract | Full Text + Links | PDF (283 K)
Keeping Time without a Clock, Neuron, Volume 50, Issue 3, 4 May 2006, Pages 348-350
Ben Collins1  and Justin Blau1   Abstract | Full Text + Links | PDF (101 K)

   生物谷专家评论说,这篇研究的重要意义在于,揭示了Clock基因在昼夜节律中的角色。而昼夜节律在生理和病理条件下越来越显得重要。近年来发现这些生物钟因子在一系列细胞中都有表达,不仅仅在神经细胞,如造血细胞,免疫细胞等,从而调节了造血细胞和免疫细胞,以及内分泌的昼夜节律。这些研究的深入,为揭示生物钟的机制十分有益。

   这些发现越来越证实了生物钟对生物体的生命活动远远超过预想,不仅影响着神经系统,免疫系统,内分泌系统,也影响心脏,肝脏,肾脏,甚至影响肿瘤的生长等,它的影响是全方位的,多层次的,从组织器官的分泌运动,到基因表达,到对外界刺激的应激反应等等,均与生物钟存在密切联系。这些联系背后都有统一的奥秘,生物钟。

另外,生物钟的调节机制也是复杂的,是一种网络化调控机制,不是某一个基因,而且一组十分复杂的基因共同构成网络样的调控,从而精确决定各种不同的节律,尤其是昼夜节律,这些基因包括Time, Clock等大家族成员。目前研究手段正如图中所示那样,越来越多,不仅是传统的电生理,现在也包括了分子生物学,遗传学等多种手段进行综合研究。

生物钟的机制揭示,不仅有助于相关药物的开发,还有助于临床疾病的预防、诊断和治疗。将来有可能会利用生物钟对疾病的预防,诊断和治疗提供有意义的参考。

本文原始出处:

Circadian Regulator CLOCK Is a Histone Acetyltransferase
Masao Doi, Jun Hirayama, and Paolo Sassone-Corsi
[Summary] [Full Text] [PDF] [Supplemental Data]

Circadian Transcription: Passing the HAT to CLOCK
Paul E. Hardin and Wangjie Yu
[Summary] [Full Text] [PDF]

拓展阅读

·控制节律的基因
·细胞层次上的生物节律
·我国科学家发现调节起搏细胞节律的新机制
·呼吸中枢与呼吸节律的形成
·细胞层次上的生物节律
·从多个振荡器的协调到昼夜节律的产生
·Current Biology:生理节律重置的双重速度
·如何根据生物钟原理安排醒睡节律及工作学习? 
·
我国科学家发现调节起搏细胞节律的新机制 
·蛋白质降解和昼夜节律
·哺乳动物昼夜节律研究新发现
·
法国发现人体生物钟调节的具体机制
·哺乳动物和果蝇有相同的生物钟基因 
·
生物钟分子揭示出精神疾病根源 
·
Science:生物钟、锂盐和双相障碍
·三种生物钟 “晨钟”最重要
·维持动物生物钟协调的分子信号
·SUMO化修饰与细胞的生物钟 
·
Cell:骨骼重塑受到生物钟的影响
·Science:法国科学家发现生物钟的调节新机制 
·
人体生物钟可能影响到药物成瘾 
·
美国科学家研究基因如何影响生物钟
·日本学者揭开生物钟神秘面纱
·日科学家编制出老鼠生物钟时刻表
·日本学者在试管内再现生物钟现象
·美研究发现生物钟可影响癌症治疗效果
·日研究人员发现生物钟遗传基因作用机制 
·传基因能调控生物钟
·
纽约大学研究人员成功模拟分子生物钟 
·
美科学家说心脏病多在上午发作缘于生物钟
·生物钟研究促进对人类疾病的深入了解 
·《PNAS》:读出你的生物钟 
·PKG对生物钟的重要影响:昼夜交替的信号 
·《Nature》:生物钟基因对血红素生物合成的影响 
·低级生物不“低级” 某些细菌有极其精确生物钟 
·日学者以鸡做实验 发现熬夜使生物钟紊乱原因 
·生物钟“钟摆” 揭开生物钟神秘面纱 
·可以调控的生物钟
·《Nature》:哺乳动物体内不止一个生物钟 
·我国科学家解生物钟之谜:蛋白质是动力之源
·日本科学家揭示生物钟同步化的机制 
·生物钟基因控制着肿瘤生长?
·生物钟对植物基因表达的影响超过预想 
·研究证实“永恒”基因在哺乳动物生物钟的关键作用
·持续黑暗下生物钟如何维持? 
·生物钟与细胞分裂有联系 
·研究发现生物钟对蓝光最敏感 
·美称人的生物钟受脑部温度直接影响 
·视网膜上的一种蛋白质可调节人体生物钟 
·生物钟 
·抑癌基因携带生物钟信息 
·生物钟对生命有何影响? 

生物钟的分子网络模型


An example of biochemical network : the circadian cycle
(Project leader : Y. Deville , P. Dupont  Researcher : G. Dooms, S. Zampelli , S. Vast, J. Fallon )
 
果蝇昼夜节律基因网络控制
 

Circadian Rhythms

A fascinating string of studies have begun to reveal that throughout the animal kingdom there are widely conserved elements of a molecular “clock” that controls rhythmic behavior – sleeping and waking cycles in humans, eclosion and locomotor activity in Drosophila, and even rhythmic behavior in Neurospora and plants [summarized in 5,6,7,8].  Because of the extensive work that had already been done in Drosophila genetics, control of circadian rhythms is best understood in the fruit fly [9].  Now we are finding human homologs to some of the major Drosophila circadian genes.  Although there are differences in circadian regulation between Drosophila and vertebrates [10], the conservation of some of the key genes in fruit fly circadian rhythms provides us with an excellent framework for studying human sleep/wake cycles.  As Young [8] observes, “It is astonishing that genetic screens are identifying the same molecular determinants of time in creatures as different as mammals and fruit flies.”

A circadian pacemaking system contains a central clock, an input system (that influences the pacemaker), and an output system (that mediates the signals from the pacemaker to cause rhythmic behavior) [5,11].  Recent studies have revealed several of the key genes involved in Drosophila’s central clock.  Wilsbacher and Takahashi [9] compile these findings into a model of the Drosophila clock.  The period (PER) and timeless (TIM) genes are two of the key players in this cycle.  The CLOCK and BMAL1 proteins stimulate transcription of PER and TIM.  PER and TIM accumulate slowly in the cytoplasm until a threshold level is reached and TIM stabilizes PER.  This accumulation is controlled by light, which degrades TIM, and by the gene doubletime (DBT), which phosphorylates and degrades PER.  After the threshold is reached, the TIM/PER dimers enter the nucleus and negatively interact with CLOCK and BMAL1 to inhibit transcription of TIM and PER.  As the TIM and PER proteins turn over, transcription begins again in the morning [6,9,10].
 
 

Figure 1: Molecular model of circadian rhythm generation in Drosophila. Events A-F occur over ~24 hours. (A) CLOCK-BMAL1 heterodimers activate per and tim promoters and activate mRNA expression. (B) per and tim mRNA are transported to the cytoplasm and translated into PER and TIM protein. (C) Protein regulation occurs in two ways: DBT protein phosphorylates and destabilizes PER, and light destroys TIM. (D) PER and TIM levels accumulate slowly.  TIM stabilizes PER and promotes nuclear transport. (E) PER and TIM dimers enter the nucleus and inhibit CLOCK-BMAL-activated transcription. (F) Protein turnover allows per and tim mRNA expression to begin again.  Adapted from [9].


 

Some of the same genes that play key roles in Drosophila circadian regulation are conserved in humans, and there are striking similarities in the regulation of the central clock.  The human CKIe gene is a homolog of the Drosophila DBT gene.  In Drosophila, DBT phosphorylates and is thought to destabilize PER [12].  This form of regulation is very similar to that seen in humans, where CKIe phosphorylates the human homolog of PER [7].

Three human homologs of PER have been identified [7,11,13]  One of these, hPER2, has been implicated in Familial Advanced Sleep Phase Syndrome (FASPS).  People with FASPS are referred to as “morning larks” – they sleep for a normal amount of time, but sleep onset occurs around 7:30 p.m., and they awaken around 4:30 a.m.  FASPS has been shown to be caused by a mutation in the caseine kinase I epsilon (CKIe) binding region of hPER2 that leads to decreased phosphorylation of hPER2 by CKIe in vitro [7].

The conservation of two of the key players in Drosophila circadian rhythms shows the similarity in the regulation of this system in flies and humans.  Because of the wealth of genetic knowledge that we have about Drosophila, and the ease of doing genetic crosses in the lab, it is much easier to study the molecular basis of circadian rhythms in fruit flies than in humans.  We can then take the findings from Drosophila and look for homologous genes in humans.


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